miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|313412957|gb|HS265450.1|HS265450 CTCCTGCACTGAATTACATCACACTTGCATCTTTCAGCTGGGATCAGGATAATGACAAAGTCAAGATATATATCTCTTTG
GAAGGAGTTGACCAGGAGAAAGTGGAGACTGAATTTAAGCCAGTGTCTTTTGATGTCAAATTTCATGATGTTCAAGGAAA
GAACTATCGATGTGCCATACCAAAACTGAACAAGGAGATAGTACCAGAGAAATGTAAGGTGGTAGTTAAACCTACAAGGG
TTATTTTCACCTTGCCCAAGGCTTCAAAAGGAAACTGGTTGGATTTGCACTACAAAGAGGATAAGCTGAAGCCGAATCTA
GATAAAGAACGAGATCCAATGGCTGGAATTATGGACCTAATGAAGAATATGTATGAGGAAGGTGATGATGAAATGAAAAA
AACAATTGCGAAAGCCTGGACCGATGCTCGATCGGGAAAAGCTGCAGACCCTCTAAAAGGGTATCCCTGAATCAATAGGG
ACGGCGACCATGTCCCAGAGTTTGGATGATTTTTGTTTCAGCTGTGCTTTTACTTTAGTCAAGTTACTTTGTTAATGCTG
AAAATTCTCTGAGTGCCCCTTTGTCTCAAGATGAATGAAGTTAGTGTTTCAATATGAATAGTTTCTTACTGTCATCCTTG
TATAAATACACATCTAATTTCCTTTATTATCATGTCTCTCCAT




Most similar to sp|Q6AYK6|CYBP_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           GN=Cacybp PE=1 SV=1
          Length = 229

 Score =  103 bits (256), Expect = 1e-21
 Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
 Frame = +3

Query: 18  ITLASFSWDQDNDKVKIYISLEGVDQ---EKVETEFKPVSFDVKFHDVQGKNYRCAIPKL 188
           + ++++ WDQ +  VKIYI+L GV Q   E V+  F   SFD+   ++ GKNY   +  L
Sbjct: 74  VKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNL 133

Query: 189 NKEI-VPEKCKVVVKPTRVIFTLPKASKGNWLDLHYKE----DKLKPNLDKERDPMAGIM 353
            K I V    K V   T +I    KA    W  L   E    +K KP+ D E DP  G+M
Sbjct: 134 LKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLM 193

Query: 354 DLMKNMYEEGDDEMKKTIAKAWTDARSGKAAD 449
           +++K +YE+GDD+MK+TI KAW ++R  +A +
Sbjct: 194 NVLKKIYEDGDDDMKRTINKAWVESREKQARE 225